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Inborn Errors of Immunity

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9 Section 3. Genetic Evaluation of Inborn Errors of Immunity Recommendation 3.1 ➤ We recommend single-gene sequencing to test patients with suspected IEI who have a similarly affected family member with a known genetic defect or who present with a condition with a defect in a gene that might not be reliably analyzed using high-throughput massively parallel sequencing. (S-H) Recommendation 3.2 ➤ We recommend targeted gene panel sequencing including genes associated with IEI or exome sequencing as an initial step for genetic diagnosis, when a familial gene defect does not explain the patient's condition. (S-H) Recommendation 3.3 ➤ We suggest whole genome sequencing of individuals with suspected IEI and non-immunologic traits or with high suspicion for a noncoding genetic defect. (C-L) Recommendation 3.4 ➤ We recommend DNA copy number variant (CNV) testing in patients with IEI with a suspected gene(s) deletion or duplication. (S-H) Recommendation 3.5 ➤ We recommend the American College of Medical Genetics and Genomics (ACMG) guidelines for evaluating gene variant pathogenicity. (S-H) Recommendation 3.6 ➤ We recommend familial genetic testing to aid in gene variant pathogenicity resolution. (S-H) Recommendation 3.7 ➤ We suggest familial genetic testing to ascertain risk of disease in currently unaffected relatives. (C-L) Recommendation 3.8 ➤ We recommend investigating multiple genetic diagnoses when a monogenic diagnosis does not explain the patient's clinical characteristics. (S-M) Recommendation 3.9 ➤ We recommend that genetic testing for patients with IEI can be ordered by clinicians with expertise in IEI. (S-M)

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